Albimonas pacifica strain CGMCC 1.11030

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Albimonas

Description

Albimonas pacifica strain CGMCC 1.11030 is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. This strain thrives optimally at a temperature of 29°C and falls within the mesophilic temperature range, indicating its preference for moderate environmental conditions. One notable aspect of Albimonas pacifica is its genomic structure, which comprises a single replicon. This may suggest a streamlined genetic organization, potentially facilitating efficient cellular processes, including replication and gene expression. Furthermore, it is important to note that this strain does not engage in sporulation, indicating a lifestyle that may be more directly reliant on favorable growth conditions without the need for survival tactics employed by spore-forming bacteria. The accession number for this strain is FOQH00000000.1, which provides a reference for researchers interested in genomic studies or further characterization of this organism. From a biological and ecological perspective, the characteristics of Albimonas pacifica strain CGMCC 1.11030 imply it may occupy niches where aerobic conditions prevail and where temperature fluctuations remain moderate. Its non-motility suggests that it may be adapted to stable environments, possibly in aquatic or sedimentary habitats, where it can play a role in nutrient cycling and interactions with other microbial communities. This adds to the understanding of microbial diversity and the ecological roles of non-motile, mesophilic bacteria in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusAlbimonas
SpeciesAlbimonas pacifica
Strainstrain CGMCC 1.11030

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Albimonas pacifica strain CGMCC 1.11030 genome assembly, contig:

Gene Summary

Adenine Count

818067 bp

Thymine Count

816546 bp

Guanine Count

2198343 bp

Cytosine Count

2194231 bp

Genome Length

6027197 bp

Protein-coding Genes

5252 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hemolysin-type calcium-binding repeat-containing proteinSAMN05216258_103112Not AvailableNegative1530801 - 153153525528.2
lsu ribosomal protein l31pSAMN05216258_103113Not AvailablePositive1532198 - 15324197975.51
chromosome partitioning proteinSAMN05216258_103114Not AvailablePositive1532844 - 153365030043.1
hypothetical proteinSAMN05216258_103115Not AvailableNegative1533467 - 153424327261.9
d-alanyl-d-alanine carboxypeptidaseSAMN05216258_103116Not AvailableNegative1534250 - 153533238089.2
phasin family proteinSAMN05216258_103117Not AvailablePositive1535664 - 153609515398.4
atp-dependent clp protease adaptor protein clpsSAMN05216258_103118Not AvailablePositive1536262 - 153673517333.7
atp-dependent clp protease atp-binding subunit clpaSAMN05216258_103119Not AvailablePositive1537179 - 153950985553.5
hypothetical proteinSAMN05216258_103120Not AvailableNegative1539648 - 154036125648.5
4a-hydroxytetrahydrobiopterin dehydrataseSAMN05216258_103121Not AvailableNegative1540358 - 154065110924.9

Displaying genes 1401 – 1410 of 5381 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.