Lactobacillus ruminis DSM 20403 = NBRC 102161

Gram-positiveRodMotileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Ligilactobacillus

Description

Lactobacillus ruminis DSM 20403, also designated as NBRC 102161, is a Gram-positive bacterium primarily found in the human gut. This species exhibits a rod shape and is classified as a facultative anaerobe, indicating its ability to thrive in both aerobic and anaerobic environments. Notably, Lactobacillus ruminis possesses true flagella, which may contribute to its motility within the gut ecosystem. This bacterium is not only associated with humans (Homo sapiens) but also has been identified in other hosts, including cattle (Bos taurus) and birds (Aves). The presence of Lactobacillus ruminis in multiple hosts suggests its adaptability and potential importance in various gut microbiomes. Lactobacillus ruminis has a single replicon, which is indicative of its genetic structure and stability. The complete genome sequence of this strain is available under the accession number FOPI00000000.1, providing a valuable resource for further research into its functional capabilities and interactions within the gut environment. The presence of Lactobacillus ruminis in the gut microbiota of different species highlights its ecological significance. It may play a role in digestion and gut health, potentially influencing the microbiome's overall balance and functionality. Understanding Lactobacillus ruminis's interactions within the gut could provide insights into its contributions to host health and nutrient absorption, as well as its potential applications in probiotic formulations.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusLigilactobacillus
SpeciesLigilactobacillus ruminis
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Lactobacillus ruminis DSM 20403 = NBRC 102161
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathuman gut
Biotic relationshipNot Available
Host(s)Homo sapiens, Bos taurus, Aves
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lactobacillus ruminis DSM 20403 = NBRC 102161 genome assembly,

Gene Summary

Adenine Count

576358 bp

Thymine Count

575252 bp

Guanine Count

439935 bp

Cytosine Count

441939 bp

Genome Length

2038062 bp

Protein-coding Genes

1913 genes

Non-Coding Genes

114 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Hypothetical proteinSAMN02910432_01239Not AvailableNegative1246059 - 124643313938.4
Phage head-tail joining proteinSAMN02910432_01240Not AvailableNegative1246430 - 124687916582.1
Phage head-tail adaptorSAMN02910432_01241Not AvailableNegative1246872 - 124722212985.6
Phage protein dna packaging proteinSAMN02910432_01242Not AvailableNegative1247188 - 124750811518.4
Major head proteinSAMN02910432_01243Not AvailableNegative1247521 - 124873844288.1
ProteaseSAMN02910432_01244Not AvailableNegative1248757 - 124946125417.0
Phage portal proteinSAMN02910432_01245Not AvailableNegative1249448 - 125057841679.4
Phage terminase-like protein large subunitSAMN02910432_01246Not AvailableNegative1250771 - 125263371522.7
Putative small subunit terminaseSAMN02910432_01247Not AvailableNegative1252648 - 125310617112.7
Hypothetical proteinSAMN02910432_01248Not AvailableNegative1253257 - 125374519530.1

Displaying genes 11 – 20 of 2027 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.