Pontibacter chinhatensis strain LP51

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter chinhatensis strain LP51 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain is notable for possessing a single replicon, which is a defining feature in its genomic structure. Its genomic data can be accessed through the accession number FOOT00000000.1, providing a key resource for further research and characterization. The classification of Pontibacter chinhatensis within the broader context of microbial diversity highlights its potential significance in various ecological settings. As a member of the Pontibacter genus, this strain may play a role in different biogeochemical processes. While specific ecological interactions and functions of strain LP51 are not detailed, the genus is often associated with environments such as soil and aquatic systems, indicating a possible contribution to nutrient cycling and microbial community dynamics. In summary, the Gram-negative, rod-shaped structure of Pontibacter chinhatensis strain LP51, along with its genomic accessibility, positions it as an organism of interest for studies in microbiology. Further investigation into its ecological roles could provide insights into its interactions within microbial communities and its impact on environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter chinhatensis
Strainstrain LP51

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pontibacter chinhatensis strain LP51 genome assembly, contig:

Gene Summary

Adenine Count

1210893 bp

Thymine Count

1222011 bp

Guanine Count

1301758 bp

Cytosine Count

1338001 bp

Genome Length

5072663 bp

Protein-coding Genes

4256 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
membrane associated serine protease, rhomboid familySAMN05421739_105153Not AvailablePositive3583238 - 358405029593.4
uncharacterized membrane protein ydjx, tvp38/tmem64 family, snare-associated domainSAMN05421739_105154Not AvailablePositive3584055 - 358484929073.8
hypothetical proteinSAMN05421739_105155Not AvailableNegative3584909 - 35850555630.27
hypothetical proteinSAMN05421739_105156Not AvailablePositive3585109 - 358563319680.4
metal dependent phosphohydrolaseSAMN05421739_105157Not AvailablePositive3585706 - 358626920977.1
hypothetical proteinSAMN05421739_105158Not AvailablePositive3586629 - 35868026144.34
hypothetical proteinSAMN05421739_105159Not AvailableNegative3586994 - 35871857274.67
sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamilySAMN05421739_105160Not AvailablePositive3587368 - 358832137282.1
hypothetical proteinSAMN05421739_105161Not AvailableNegative3588331 - 358876516940.4
hypothetical proteinSAMN05421739_105162Not AvailableNegative3588991 - 358942216212.4

Displaying genes 3041 – 3050 of 4305 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.