Pontibacter chinhatensis strain LP51

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter chinhatensis strain LP51 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain is notable for possessing a single replicon, which is a defining feature in its genomic structure. Its genomic data can be accessed through the accession number FOOT00000000.1, providing a key resource for further research and characterization. The classification of Pontibacter chinhatensis within the broader context of microbial diversity highlights its potential significance in various ecological settings. As a member of the Pontibacter genus, this strain may play a role in different biogeochemical processes. While specific ecological interactions and functions of strain LP51 are not detailed, the genus is often associated with environments such as soil and aquatic systems, indicating a possible contribution to nutrient cycling and microbial community dynamics. In summary, the Gram-negative, rod-shaped structure of Pontibacter chinhatensis strain LP51, along with its genomic accessibility, positions it as an organism of interest for studies in microbiology. Further investigation into its ecological roles could provide insights into its interactions within microbial communities and its impact on environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter chinhatensis
Strainstrain LP51

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pontibacter chinhatensis strain LP51 genome assembly, contig:

Gene Summary

Adenine Count

1210893 bp

Thymine Count

1222011 bp

Guanine Count

1301758 bp

Cytosine Count

1338001 bp

Genome Length

5072663 bp

Protein-coding Genes

4256 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lsu ribosomal protein l1pSAMN05421739_104316Not AvailableNegative3226778 - 322747024677.0
lsu ribosomal protein l11pSAMN05421739_104317Not AvailableNegative3227484 - 322792715759.3
transcription antitermination protein nusgSAMN05421739_104318Not AvailableNegative3227941 - 322850120954.3
preprotein translocase subunit seceSAMN05421739_104319Not AvailableNegative3228513 - 32287047243.72
Trna-trpNot AvailableNot AvailablePositive3228730 - 3228805Not Available
elongation factor tuSAMN05421739_104321Not AvailableNegative3228914 - 323010143341.3
Trna-thrNot AvailableNot AvailablePositive3230175 - 3230246Not Available
Trna-glyNot AvailableNot AvailablePositive3230358 - 3230430Not Available
Trna-tyrNot AvailableNot AvailablePositive3230512 - 3230598Not Available
aminopeptidase nSAMN05421739_104325Not AvailableNegative3230748 - 323329196774.2

Displaying genes 2721 – 2730 of 4305 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.