Pontibacter chinhatensis strain LP51

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter chinhatensis strain LP51 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain is notable for possessing a single replicon, which is a defining feature in its genomic structure. Its genomic data can be accessed through the accession number FOOT00000000.1, providing a key resource for further research and characterization. The classification of Pontibacter chinhatensis within the broader context of microbial diversity highlights its potential significance in various ecological settings. As a member of the Pontibacter genus, this strain may play a role in different biogeochemical processes. While specific ecological interactions and functions of strain LP51 are not detailed, the genus is often associated with environments such as soil and aquatic systems, indicating a possible contribution to nutrient cycling and microbial community dynamics. In summary, the Gram-negative, rod-shaped structure of Pontibacter chinhatensis strain LP51, along with its genomic accessibility, positions it as an organism of interest for studies in microbiology. Further investigation into its ecological roles could provide insights into its interactions within microbial communities and its impact on environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter chinhatensis
Strainstrain LP51

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pontibacter chinhatensis strain LP51 genome assembly, contig:

Gene Summary

Adenine Count

1210893 bp

Thymine Count

1222011 bp

Guanine Count

1301758 bp

Cytosine Count

1338001 bp

Genome Length

5072663 bp

Protein-coding Genes

4256 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rnase rSAMN05421739_103237Not AvailableNegative2500079 - 250232885567.5
tigr01619 family proteinSAMN05421739_103238Not AvailableNegative2502522 - 250328629205.0
peptide/nickel transport system atp-binding proteinSAMN05421739_103239Not AvailableNegative2503344 - 250514366411.7
2-haloacid dehalogenaseSAMN05421739_103240Not AvailablePositive2505279 - 250588423256.6
hypothetical proteinSAMN05421739_103241Not AvailableNegative2505924 - 250631915743.5
signal peptidase ii aspartic peptidase. merops family a08SAMN05421739_103242Not AvailableNegative2506405 - 250702523541.2
isoleucyl-trna synthetaseSAMN05421739_103243Not AvailableNegative2507149 - 2510502127735.0
uncharacterized conserved protein yjbj, upf0337 familySAMN05421739_103244Not AvailableNegative2511266 - 25114577667.96
glycyl-trna synthetaseSAMN05421739_103245Not AvailableNegative2511611 - 251311357825.8
phosphate/sulfate permeaseSAMN05421739_103246Not AvailablePositive2513308 - 251448044626.5

Displaying genes 2071 – 2080 of 4305 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.