Pontibacter chinhatensis strain LP51

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter chinhatensis strain LP51 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain is notable for possessing a single replicon, which is a defining feature in its genomic structure. Its genomic data can be accessed through the accession number FOOT00000000.1, providing a key resource for further research and characterization. The classification of Pontibacter chinhatensis within the broader context of microbial diversity highlights its potential significance in various ecological settings. As a member of the Pontibacter genus, this strain may play a role in different biogeochemical processes. While specific ecological interactions and functions of strain LP51 are not detailed, the genus is often associated with environments such as soil and aquatic systems, indicating a possible contribution to nutrient cycling and microbial community dynamics. In summary, the Gram-negative, rod-shaped structure of Pontibacter chinhatensis strain LP51, along with its genomic accessibility, positions it as an organism of interest for studies in microbiology. Further investigation into its ecological roles could provide insights into its interactions within microbial communities and its impact on environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter chinhatensis
Strainstrain LP51

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pontibacter chinhatensis strain LP51 genome assembly, contig:

Gene Summary

Adenine Count

1210893 bp

Thymine Count

1222011 bp

Guanine Count

1301758 bp

Cytosine Count

1338001 bp

Genome Length

5072663 bp

Protein-coding Genes

4256 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-binding cassette, subfamily bSAMN05421739_103227Not AvailablePositive2490124 - 249198069663.8
protein of unknown functionSAMN05421739_103228Not AvailableNegative2492041 - 249288032054.9
atp-binding cassette, subfamily bSAMN05421739_103229Not AvailablePositive2493057 - 24932155767.04
protein of unknown functionSAMN05421739_103230Not AvailableNegative2493220 - 249399930736.8
uncharacterized nad(p)/fad-binding protein ydhsSAMN05421739_103231Not AvailableNegative2494044 - 249546252413.4
hypothetical proteinSAMN05421739_103232Not AvailableNegative2495768 - 249619916246.5
uncaracterized surface protein containing fasciclin (fas1) repeatsSAMN05421739_103233Not AvailableNegative2496342 - 249680617157.1
membrane associated serine protease, rhomboid familySAMN05421739_103234Not AvailableNegative2496900 - 249752923811.2
haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)eSAMN05421739_103235Not AvailablePositive2497741 - 249841225269.2
geranylgeranyl diphosphate synthase, type iiSAMN05421739_103236Not AvailableNegative2499097 - 250007136812.5

Displaying genes 2061 – 2070 of 4305 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.