Pontibacter chinhatensis strain LP51

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter chinhatensis strain LP51 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain is notable for possessing a single replicon, which is a defining feature in its genomic structure. Its genomic data can be accessed through the accession number FOOT00000000.1, providing a key resource for further research and characterization. The classification of Pontibacter chinhatensis within the broader context of microbial diversity highlights its potential significance in various ecological settings. As a member of the Pontibacter genus, this strain may play a role in different biogeochemical processes. While specific ecological interactions and functions of strain LP51 are not detailed, the genus is often associated with environments such as soil and aquatic systems, indicating a possible contribution to nutrient cycling and microbial community dynamics. In summary, the Gram-negative, rod-shaped structure of Pontibacter chinhatensis strain LP51, along with its genomic accessibility, positions it as an organism of interest for studies in microbiology. Further investigation into its ecological roles could provide insights into its interactions within microbial communities and its impact on environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter chinhatensis
Strainstrain LP51

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pontibacter chinhatensis strain LP51 genome assembly, contig:

Gene Summary

Adenine Count

1210893 bp

Thymine Count

1222011 bp

Guanine Count

1301758 bp

Cytosine Count

1338001 bp

Genome Length

5072663 bp

Protein-coding Genes

4256 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase rpb6SAMN05421739_102465Not AvailableNegative1872319 - 187264812446.7
beta-barrel assembly machine subunit bamdSAMN05421739_102466Not AvailableNegative1872660 - 187348732463.7
osta-like proteinSAMN05421739_102467Not AvailableNegative1873559 - 187524163156.2
trna(ile)-lysidine synthaseSAMN05421739_102468Not AvailablePositive1875374 - 187670850723.0
malate dehydrogenase (nad)SAMN05421739_102469Not AvailablePositive1876876 - 187781433487.6
surface antigenSAMN05421739_102470Not AvailableNegative1878819 - 188144399651.2
membrane associated serine protease, rhomboid familySAMN05421739_102471Not AvailableNegative1881581 - 188248633676.6
rhomboid family proteinSAMN05421739_102472Not AvailableNegative1882493 - 188327230074.7
dna mismatch repair protein mutlSAMN05421739_102473Not AvailableNegative1883401 - 188526068392.0
beta-glucosidaseSAMN05421739_102474Not AvailablePositive1885684 - 1888632108977.0

Displaying genes 1541 – 1550 of 4305 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.