Lactobacillus bombicola strain R-53102

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Lactobacillus

Description

Lactobacillus bombicola strain R-53102 is a rod-shaped bacterium characterized by the presence of flagella, which may facilitate motility. This strain features a single replicon, indicating a streamlined genetic structure that could play a role in its adaptability and efficiency in various environments. The genomic data for this strain is accessible under the accession number FOMN00000000.1. Lactobacillus species are known for their importance in fermentation processes and contributions to food microbiology, particularly in the production of dairy products. While specific ecological roles of Lactobacillus bombicola strain R-53102 are not detailed, members of the Lactobacillus genus are generally recognized for their beneficial effects on gut health, including the ability to produce lactic acid, which can inhibit pathogenic bacteria and promote a balanced microbiota. The presence of flagella in L. bombicola strain R-53102 suggests potential motility, which could enhance its capability to colonize various niches within its ecological environment. Understanding the motility and genetic characteristics of this strain could provide insights into how it interacts with other microorganisms and its potential applications in biotechnological processes or probiotics. Overall, the traits of Lactobacillus bombicola strain R-53102 underscore its relevance in both ecological and industrial contexts, further emphasizing the importance of studying such microbes.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusLactobacillus
SpeciesLactobacillus bombicola
Strainstrain R-53102

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Lactobacillus bombicola strain R-53102
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lactobacillus bombicola strain R-53102 genome assembly, contig:

Gene Summary

Adenine Count

547523 bp

Thymine Count

547125 bp

Guanine Count

286729 bp

Cytosine Count

293676 bp

Genome Length

1675906 bp

Protein-coding Genes

1509 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
n-acetyldiaminopimelate deacetylaseSAMN04487792_0622Not AvailableNegative641610 - 64274941847.3
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-acetyltransferaseSAMN04487792_0623Not AvailableNegative642754 - 64346424698.2
diaminopimelate decarboxylaseSAMN04487792_0624Not AvailableNegative643483 - 64477847682.3
aspartate kinaseSAMN04487792_0625Not AvailablePositive645214 - 64656650901.1
diaminopimelate epimeraseSAMN04487792_0626Not AvailablePositive646584 - 64756436129.1
acetyl esterase/lipaseSAMN04487792_0627Not AvailablePositive647676 - 64857234189.6
arac-type dna-binding proteinSAMN04487792_0628Not AvailablePositive648648 - 64951733529.6
predicted arabinose efflux permease, mfs familySAMN04487792_0629Not AvailablePositive649569 - 65075042610.0
amino acid/polyamine/organocation transporter, apc superfamily (tc 2.a.3)SAMN04487792_0630Not AvailableNegative650916 - 65231049966.6
putative glutamine amidotransferaseSAMN04487792_0631Not AvailableNegative652315 - 65304327058.7

Displaying genes 661 – 670 of 1635 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.