Lactobacillus bombicola strain R-53102

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Lactobacillus

Description

Lactobacillus bombicola strain R-53102 is a rod-shaped bacterium characterized by the presence of flagella, which may facilitate motility. This strain features a single replicon, indicating a streamlined genetic structure that could play a role in its adaptability and efficiency in various environments. The genomic data for this strain is accessible under the accession number FOMN00000000.1. Lactobacillus species are known for their importance in fermentation processes and contributions to food microbiology, particularly in the production of dairy products. While specific ecological roles of Lactobacillus bombicola strain R-53102 are not detailed, members of the Lactobacillus genus are generally recognized for their beneficial effects on gut health, including the ability to produce lactic acid, which can inhibit pathogenic bacteria and promote a balanced microbiota. The presence of flagella in L. bombicola strain R-53102 suggests potential motility, which could enhance its capability to colonize various niches within its ecological environment. Understanding the motility and genetic characteristics of this strain could provide insights into how it interacts with other microorganisms and its potential applications in biotechnological processes or probiotics. Overall, the traits of Lactobacillus bombicola strain R-53102 underscore its relevance in both ecological and industrial contexts, further emphasizing the importance of studying such microbes.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusLactobacillus
SpeciesLactobacillus bombicola
Strainstrain R-53102

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Lactobacillus bombicola strain R-53102
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lactobacillus bombicola strain R-53102 genome assembly, contig:

Gene Summary

Adenine Count

547523 bp

Thymine Count

547125 bp

Guanine Count

286729 bp

Cytosine Count

293676 bp

Genome Length

1675906 bp

Protein-coding Genes

1509 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleotide-binding universal stress protein, uspa familySAMN04487792_1030Not AvailableNegative1041793 - 104224516769.0
signal peptide-containing protein, ysirk familySAMN04487792_1031Not AvailablePositive1043250 - 1052116316755.0
xylose isomerase-like tim barrelSAMN04487792_1032Not AvailableNegative1052117 - 105250315177.2
l-xylulokinaseSAMN04487792_1033Not AvailableNegative1052484 - 105402556298.8
hypothetical proteinSAMN04487792_1034Not AvailableNegative1054037 - 105503838077.0
d-3-phosphoglycerate dehydrogenaseSAMN04487792_1035Not AvailableNegative1055154 - 105611035066.4
hypothetical proteinSAMN04487792_1036Not AvailableNegative1056126 - 105709736867.5
pts system iic component, gat family (tc 4.a.5)SAMN04487792_1037Not AvailableNegative1057117 - 105857153004.9
sugar phosphate isomerase/epimeraseSAMN04487792_1038Not AvailableNegative1058588 - 105931927665.9
transcriptional regulator, laci familySAMN04487792_1039Not AvailablePositive1059452 - 106045638246.7

Displaying genes 1051 – 1060 of 1635 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.