Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola nitratireducens |
| Strain | strain DSM 29619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
723621 bp
Thymine Count
732084 bp
Guanine Count
1336110 bp
Cytosine Count
1276459 bp
Genome Length
4068972 bp
Protein-coding Genes
3819 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small-conductance mechanosensitive channel | SAMN05421762_0961 | Not Available | Negative | 979007 - 980365 | 48498.4 |
| sh3-like domain-containing protein | SAMN05421762_0962 | Not Available | Negative | 980597 - 981130 | 19780.9 |
| glyoxylate reductase | SAMN05421762_0963 | Not Available | Positive | 981253 - 982239 | 36146.0 |
| hypothetical protein | SAMN05421762_0964 | Not Available | Positive | 982374 - 982889 | 18373.8 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05421762_0965 | Not Available | Positive | 982864 - 983799 | 33412.2 |
| cob(i)alamin adenosyltransferase | SAMN05421762_0966 | Not Available | Negative | 983804 - 984376 | 20543.4 |
| hypoxia induced protein conserved region | SAMN05421762_0967 | Not Available | Negative | 984378 - 984575 | 6963.97 |
| short-chain dehydrogenase | SAMN05421762_0968 | Not Available | Negative | 984646 - 985476 | 30257.4 |
| sh3 domain-containing protein | SAMN05421762_0969 | Not Available | Negative | 985492 - 986082 | 21094.1 |
| topoisomerase-4 subunit a | SAMN05421762_0970 | Not Available | Positive | 986231 - 988540 | 85439.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
