Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola nitratireducens |
| Strain | strain DSM 29619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
723621 bp
Thymine Count
732084 bp
Guanine Count
1336110 bp
Cytosine Count
1276459 bp
Genome Length
4068972 bp
Protein-coding Genes
3819 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05421762_0868 | Not Available | Positive | 882271 - 883488 | 43266.4 |
| hypothetical protein | SAMN05421762_0869 | Not Available | Positive | 883548 - 884693 | 40756.9 |
| trap transporter, 4tm/12tm fusion protein | SAMN05421762_0870 | Not Available | Positive | 884760 - 886679 | 66672.8 |
| dna-binding transcriptional regulator, lysr family | SAMN05421762_0871 | Not Available | Negative | 886746 - 887669 | 34274.3 |
| lysr family transcriptional regulator, nitrogen assimilation regulatory protein | SAMN05421762_0872 | Not Available | Positive | 887845 - 888795 | 34578.8 |
| 3-methylfumaryl-coa hydratase | SAMN05421762_0873 | Not Available | Negative | 888852 - 889688 | 31018.8 |
| acyl-coa dehydrogenase | SAMN05421762_0874 | Not Available | Negative | 889749 - 890915 | 43102.3 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05421762_0875 | Not Available | Negative | 890961 - 892100 | 40525.1 |
| citrate lyase subunit beta / citryl-coa lyase | SAMN05421762_0876 | Not Available | Positive | 892368 - 893177 | 27764.7 |
| 2-methylcitrate dehydratase prpd | SAMN05421762_0877 | Not Available | Positive | 893174 - 894502 | 45676.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
