Pseudooceanicola nitratireducens strain DSM 29619

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Pseudooceanicola

Description

Pseudooceanicola nitratireducens strain DSM 29619 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This organism is categorized as mesophilic, with an optimal growth temperature of 29°C, indicating that it thrives in moderate temperature environments. The strain possesses a single replicon, which is significant for its genomic structure and replication process. It is classified under the accession number FOLX00000000.1, providing a reference for genomic and biochemical studies. Biologically, Pseudooceanicola nitratireducens is notable for its ability to reduce nitrate, suggesting a potential ecological role in nitrogen cycling within its habitat. This capability may contribute to nutrient turnover and the maintenance of ecosystem health, particularly in environments where nitrate is a limiting nutrient. Understanding the metabolic pathways and ecological interactions of this strain could provide insights into its contributions to biogeochemical cycles and the overall functioning of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPseudooceanicola
SpeciesPseudooceanicola nitratireducens
Strainstrain DSM 29619

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudooceanicola nitratireducens strain DSM 29619 genome assembly,

Gene Summary

Adenine Count

723621 bp

Thymine Count

732084 bp

Guanine Count

1336110 bp

Cytosine Count

1276459 bp

Genome Length

4068972 bp

Protein-coding Genes

3819 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid/amide abc transporter substrate-binding protein, haat familySAMN05421762_0838Not AvailableNegative850509 - 85172642581.4
transcriptional regulator, arac familySAMN05421762_0839Not AvailablePositive851911 - 85278632263.0
trap-type c4-dicarboxylate transport system, substrate-binding proteinSAMN05421762_0840Not AvailableNegative852847 - 85382734396.1
trap transporter, dctm subunitSAMN05421762_0841Not AvailableNegative853878 - 85518244711.6
trap-type c4-dicarboxylate transport system, small permease componentSAMN05421762_0842Not AvailableNegative855182 - 85568818114.0
dna-binding transcriptional regulator, lysr familySAMN05421762_0843Not AvailableNegative855856 - 85703743043.0
catechol 2,3-dioxygenaseSAMN05421762_0844Not AvailablePositive857282 - 85824136067.0
4-carboxy-4-hydroxy-2-oxoadipate aldolaseSAMN05421762_0845Not AvailablePositive858303 - 85897423548.3
putative flippase gtra (transmembrane translocase of bactoprenol-linked glucose)SAMN05421762_0846Not AvailableNegative858981 - 85937614236.5
4-hydroxybenzoate polyprenyltransferaseSAMN05421762_0847Not AvailableNegative859373 - 86062644822.3

Displaying genes 851 – 860 of 3875 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.