Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola nitratireducens |
| Strain | strain DSM 29619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
723621 bp
Thymine Count
732084 bp
Guanine Count
1336110 bp
Cytosine Count
1276459 bp
Genome Length
4068972 bp
Protein-coding Genes
3819 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN05421762_0496 | Not Available | Positive | 494643 - 495263 | 22056.8 |
| s-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase | SAMN05421762_0497 | Not Available | Negative | 495427 - 496557 | 40054.2 |
| peptidase inhibitor i78 family protein | SAMN05421762_0498 | Not Available | Positive | 496700 - 497002 | 10742.9 |
| cytochrome c556 | SAMN05421762_0499 | Not Available | Negative | 497064 - 497507 | 15397.6 |
| protein imub | SAMN05421762_0500 | Not Available | Positive | 497706 - 499382 | 60922.4 |
| 16s rrna (guanine966-n2)-methyltransferase | SAMN05421762_0501 | Not Available | Negative | 499415 - 499969 | 19646.7 |
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit | SAMN05421762_0502 | Not Available | Negative | 499970 - 501184 | 43202.7 |
| peroxiredoxin | SAMN05421762_0503 | Not Available | Positive | 501270 - 501758 | 17113.4 |
| protein-tyrosine phosphatase | SAMN05421762_0504 | Not Available | Negative | 501997 - 502566 | 19886.6 |
| dna-binding transcriptional regulator, gntr family | SAMN05421762_0505 | Not Available | Positive | 502709 - 503320 | 22517.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
