Pseudooceanicola nitratireducens strain DSM 29619

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Pseudooceanicola

Description

Pseudooceanicola nitratireducens strain DSM 29619 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This organism is categorized as mesophilic, with an optimal growth temperature of 29°C, indicating that it thrives in moderate temperature environments. The strain possesses a single replicon, which is significant for its genomic structure and replication process. It is classified under the accession number FOLX00000000.1, providing a reference for genomic and biochemical studies. Biologically, Pseudooceanicola nitratireducens is notable for its ability to reduce nitrate, suggesting a potential ecological role in nitrogen cycling within its habitat. This capability may contribute to nutrient turnover and the maintenance of ecosystem health, particularly in environments where nitrate is a limiting nutrient. Understanding the metabolic pathways and ecological interactions of this strain could provide insights into its contributions to biogeochemical cycles and the overall functioning of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPseudooceanicola
SpeciesPseudooceanicola nitratireducens
Strainstrain DSM 29619

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudooceanicola nitratireducens strain DSM 29619 genome assembly,

Gene Summary

Adenine Count

723621 bp

Thymine Count

732084 bp

Guanine Count

1336110 bp

Cytosine Count

1276459 bp

Genome Length

4068972 bp

Protein-coding Genes

3819 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycine oxidaseSAMN05421762_0012Not AvailableNegative8627 - 973339252.3
hydroxymethylpyrimidine synthaseSAMN05421762_0013Not AvailableNegative9730 - 1160768469.5
2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase)SAMN05421762_0014Not AvailableNegative12025 - 1284629194.2
3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase)SAMN05421762_0015Not AvailableNegative12843 - 1363428406.8
arabinose-5-phosphate isomeraseSAMN05421762_0016Not AvailableNegative13644 - 1459432696.4
uncaracterized surface protein containing fasciclin (fas1) repeatsSAMN05421762_0017Not AvailablePositive14861 - 1534916654.9
protein of unknown functionSAMN05421762_0018Not AvailableNegative15439 - 1590917243.3
atp-dependent clp protease atp-binding subunit clpbSAMN05421762_0019Not AvailableNegative16101 - 1871995322.3
hypothetical proteinSAMN05421762_0020Not AvailablePositive18921 - 1922311245.4
orotidine-5'-phosphate decarboxylaseSAMN05421762_0021Not AvailablePositive19530 - 2024324501.5

Displaying genes 31 – 40 of 3875 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.