Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola nitratireducens |
| Strain | strain DSM 29619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
723621 bp
Thymine Count
732084 bp
Guanine Count
1336110 bp
Cytosine Count
1276459 bp
Genome Length
4068972 bp
Protein-coding Genes
3819 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine oxidase | SAMN05421762_0012 | Not Available | Negative | 8627 - 9733 | 39252.3 |
| hydroxymethylpyrimidine synthase | SAMN05421762_0013 | Not Available | Negative | 9730 - 11607 | 68469.5 |
| 2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase) | SAMN05421762_0014 | Not Available | Negative | 12025 - 12846 | 29194.2 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | SAMN05421762_0015 | Not Available | Negative | 12843 - 13634 | 28406.8 |
| arabinose-5-phosphate isomerase | SAMN05421762_0016 | Not Available | Negative | 13644 - 14594 | 32696.4 |
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN05421762_0017 | Not Available | Positive | 14861 - 15349 | 16654.9 |
| protein of unknown function | SAMN05421762_0018 | Not Available | Negative | 15439 - 15909 | 17243.3 |
| atp-dependent clp protease atp-binding subunit clpb | SAMN05421762_0019 | Not Available | Negative | 16101 - 18719 | 95322.3 |
| hypothetical protein | SAMN05421762_0020 | Not Available | Positive | 18921 - 19223 | 11245.4 |
| orotidine-5'-phosphate decarboxylase | SAMN05421762_0021 | Not Available | Positive | 19530 - 20243 | 24501.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
