Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola nitratireducens |
| Strain | strain DSM 29619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
723621 bp
Thymine Count
732084 bp
Guanine Count
1336110 bp
Cytosine Count
1276459 bp
Genome Length
4068972 bp
Protein-coding Genes
3819 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putrescine transport system substrate-binding protein | SAMN05421762_0314 | Not Available | Positive | 316206 - 317294 | 39350.0 |
| putrescine transport system atp-binding protein | SAMN05421762_0315 | Not Available | Positive | 317382 - 318503 | 41657.3 |
| putrescine transport system permease protein | SAMN05421762_0316 | Not Available | Positive | 318553 - 319443 | 33334.6 |
| putrescine transport system permease protein | SAMN05421762_0317 | Not Available | Positive | 319440 - 320255 | 29131.3 |
| glycine/d-amino acid oxidase | SAMN05421762_0318 | Not Available | Positive | 320257 - 321600 | 48041.4 |
| acetylornithine deacetylase | SAMN05421762_0319 | Not Available | Negative | 321585 - 322745 | 42004.4 |
| ectoine hydrolase | SAMN05421762_0320 | Not Available | Negative | 322742 - 323926 | 44163.3 |
| l-2,4-diaminobutyrate transaminase | SAMN05421762_0321 | Not Available | Positive | 324037 - 325407 | 49179.9 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN05421762_0322 | Not Available | Positive | 325614 - 326702 | 40247.4 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN05421762_0323 | Not Available | Positive | 326814 - 327923 | 40404.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
