Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola nitratireducens |
| Strain | strain DSM 29619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
723621 bp
Thymine Count
732084 bp
Guanine Count
1336110 bp
Cytosine Count
1276459 bp
Genome Length
4068972 bp
Protein-coding Genes
3819 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal large subunit pseudouridine synthase a | SAMN05421762_0274 | Not Available | Positive | 273678 - 274325 | 24193.3 |
| transglycosylase slt domain-containing protein | SAMN05421762_0275 | Not Available | Negative | 274347 - 274841 | 18294.0 |
| hypothetical protein | SAMN05421762_0276 | Not Available | Negative | 274961 - 275617 | 23379.8 |
| aldehyde dehydrogenase (nad+) | SAMN05421762_0277 | Not Available | Negative | 275809 - 277254 | 51689.7 |
| 1-cys peroxiredoxin | SAMN05421762_0278 | Not Available | Positive | 277453 - 278106 | 23721.2 |
| protein of unknown function | SAMN05421762_0279 | Not Available | Positive | 278220 - 278993 | 28588.5 |
| glycine oxidase | SAMN05421762_0280 | Not Available | Negative | 279001 - 280038 | 36233.0 |
| trna u34 5-methylaminomethyl-2-thiouridine-forming methyltransferase mnmc | SAMN05421762_0281 | Not Available | Positive | 280123 - 280845 | 26261.7 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05421762_0282 | Not Available | Positive | 280838 - 281704 | 31368.3 |
| soluble lytic murein transglycosylase | SAMN05421762_0283 | Not Available | Negative | 281669 - 283672 | 72758.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
