Pseudooceanicola nitratireducens strain DSM 29619

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Pseudooceanicola

Description

Pseudooceanicola nitratireducens strain DSM 29619 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This organism is categorized as mesophilic, with an optimal growth temperature of 29°C, indicating that it thrives in moderate temperature environments. The strain possesses a single replicon, which is significant for its genomic structure and replication process. It is classified under the accession number FOLX00000000.1, providing a reference for genomic and biochemical studies. Biologically, Pseudooceanicola nitratireducens is notable for its ability to reduce nitrate, suggesting a potential ecological role in nitrogen cycling within its habitat. This capability may contribute to nutrient turnover and the maintenance of ecosystem health, particularly in environments where nitrate is a limiting nutrient. Understanding the metabolic pathways and ecological interactions of this strain could provide insights into its contributions to biogeochemical cycles and the overall functioning of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPseudooceanicola
SpeciesPseudooceanicola nitratireducens
Strainstrain DSM 29619

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudooceanicola nitratireducens strain DSM 29619 genome assembly,

Gene Summary

Adenine Count

723621 bp

Thymine Count

732084 bp

Guanine Count

1336110 bp

Cytosine Count

1276459 bp

Genome Length

4068972 bp

Protein-coding Genes

3819 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thiosulfate-binding protein soxySAMN05421762_1513Not AvailablePositive1535901 - 153631713464.1
sulfur compound chelating protein soxzSAMN05421762_1514Not AvailablePositive1536342 - 153667111939.0
diheme cytochrome soxa (sulfur oxidation)SAMN05421762_1515Not AvailablePositive1536781 - 153765631818.1
sulfate thiol esterase soxbSAMN05421762_1516Not AvailablePositive1537752 - 153944961908.3
sulfur dehydrogenase subunit soxcSAMN05421762_1517Not AvailablePositive1539534 - 154082047114.6
sulfur dehydrogenase subunit soxdSAMN05421762_1518Not AvailablePositive1540804 - 154209045594.8
atp-dependent clp protease proteolytic subunit clppSAMN05421762_1519Not AvailablePositive1542500 - 154313223280.9
atp-dependent clp protease atp-binding subunit clpxSAMN05421762_1520Not AvailablePositive1543282 - 154455045891.0
enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 familySAMN05421762_1521Not AvailablePositive1544614 - 154497012762.3
nadh:ubiquinone oxidoreductase subunitSAMN05421762_1522Not AvailablePositive1545228 - 154561114535.9

Displaying genes 1521 – 1530 of 3875 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.