Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola nitratireducens |
| Strain | strain DSM 29619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
723621 bp
Thymine Count
732084 bp
Guanine Count
1336110 bp
Cytosine Count
1276459 bp
Genome Length
4068972 bp
Protein-coding Genes
3819 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiosulfate-binding protein soxy | SAMN05421762_1513 | Not Available | Positive | 1535901 - 1536317 | 13464.1 |
| sulfur compound chelating protein soxz | SAMN05421762_1514 | Not Available | Positive | 1536342 - 1536671 | 11939.0 |
| diheme cytochrome soxa (sulfur oxidation) | SAMN05421762_1515 | Not Available | Positive | 1536781 - 1537656 | 31818.1 |
| sulfate thiol esterase soxb | SAMN05421762_1516 | Not Available | Positive | 1537752 - 1539449 | 61908.3 |
| sulfur dehydrogenase subunit soxc | SAMN05421762_1517 | Not Available | Positive | 1539534 - 1540820 | 47114.6 |
| sulfur dehydrogenase subunit soxd | SAMN05421762_1518 | Not Available | Positive | 1540804 - 1542090 | 45594.8 |
| atp-dependent clp protease proteolytic subunit clpp | SAMN05421762_1519 | Not Available | Positive | 1542500 - 1543132 | 23280.9 |
| atp-dependent clp protease atp-binding subunit clpx | SAMN05421762_1520 | Not Available | Positive | 1543282 - 1544550 | 45891.0 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05421762_1521 | Not Available | Positive | 1544614 - 1544970 | 12762.3 |
| nadh:ubiquinone oxidoreductase subunit | SAMN05421762_1522 | Not Available | Positive | 1545228 - 1545611 | 14535.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
