Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola nitratireducens |
| Strain | strain DSM 29619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
723621 bp
Thymine Count
732084 bp
Guanine Count
1336110 bp
Cytosine Count
1276459 bp
Genome Length
4068972 bp
Protein-coding Genes
3819 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycolate phosphatase | SAMN05421762_1453 | Not Available | Positive | 1472808 - 1473470 | 23410.7 |
| uncharacterized membrane protein yebe, duf533 family | SAMN05421762_1454 | Not Available | Negative | 1473493 - 1474251 | 25810.3 |
| protein of unknown function | SAMN05421762_1455 | Not Available | Negative | 1474367 - 1474855 | 17584.1 |
| acetyl esterase | SAMN05421762_1456 | Not Available | Negative | 1474852 - 1475778 | 33564.6 |
| transcriptional regulator, tetr family | SAMN05421762_1457 | Not Available | Negative | 1475815 - 1476495 | 25629.5 |
| shikimate dehydrogenase | SAMN05421762_1458 | Not Available | Positive | 1476637 - 1477563 | 32332.7 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05421762_1459 | Not Available | Positive | 1477585 - 1478559 | 35206.5 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05421762_1460 | Not Available | Positive | 1478664 - 1479185 | 20120.9 |
| trap transporter, dctm subunit | SAMN05421762_1461 | Not Available | Positive | 1479178 - 1480473 | 46240.5 |
| multidrug efflux pump subunit acrb | SAMN05421762_1462 | Not Available | Negative | 1480696 - 1483782 | 109035.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
