Pseudooceanicola nitratireducens strain DSM 29619

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Pseudooceanicola

Description

Pseudooceanicola nitratireducens strain DSM 29619 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This organism is categorized as mesophilic, with an optimal growth temperature of 29°C, indicating that it thrives in moderate temperature environments. The strain possesses a single replicon, which is significant for its genomic structure and replication process. It is classified under the accession number FOLX00000000.1, providing a reference for genomic and biochemical studies. Biologically, Pseudooceanicola nitratireducens is notable for its ability to reduce nitrate, suggesting a potential ecological role in nitrogen cycling within its habitat. This capability may contribute to nutrient turnover and the maintenance of ecosystem health, particularly in environments where nitrate is a limiting nutrient. Understanding the metabolic pathways and ecological interactions of this strain could provide insights into its contributions to biogeochemical cycles and the overall functioning of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPseudooceanicola
SpeciesPseudooceanicola nitratireducens
Strainstrain DSM 29619

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudooceanicola nitratireducens strain DSM 29619 genome assembly,

Gene Summary

Adenine Count

723621 bp

Thymine Count

732084 bp

Guanine Count

1336110 bp

Cytosine Count

1276459 bp

Genome Length

4068972 bp

Protein-coding Genes

3819 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenaseSAMN05421762_1263Not AvailableNegative1273398 - 127489453161.1
4-hydroxy-tetrahydrodipicolinate synthaseSAMN05421762_1264Not AvailableNegative1274899 - 127581633481.6
transcriptional regulator, gntr familySAMN05421762_1265Not AvailableNegative1275824 - 127652825884.9
transcriptional regulator, arac family with amidase-like domainSAMN05421762_1266Not AvailablePositive1276645 - 127761035132.0
cupin domain proteinSAMN05421762_1267Not AvailableNegative1277710 - 127810513929.4
dna-binding transcriptional regulator, lysr familySAMN05421762_1268Not AvailableNegative1278249 - 127917234002.6
choline-sulfataseSAMN05421762_1269Not AvailablePositive1279406 - 128092657589.3
glycine betaine/proline transport system substrate-binding proteinSAMN05421762_1270Not AvailablePositive1281168 - 128213934775.7
glycine betaine/proline transport system permease proteinSAMN05421762_1271Not AvailablePositive1282220 - 128325437419.9
glycine betaine/proline transport system atp-binding proteinSAMN05421762_1272Not AvailablePositive1283251 - 128432139705.0

Displaying genes 1271 – 1280 of 3875 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.