Pseudooceanicola nitratireducens strain DSM 29619

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Pseudooceanicola

Description

Pseudooceanicola nitratireducens strain DSM 29619 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This organism is categorized as mesophilic, with an optimal growth temperature of 29°C, indicating that it thrives in moderate temperature environments. The strain possesses a single replicon, which is significant for its genomic structure and replication process. It is classified under the accession number FOLX00000000.1, providing a reference for genomic and biochemical studies. Biologically, Pseudooceanicola nitratireducens is notable for its ability to reduce nitrate, suggesting a potential ecological role in nitrogen cycling within its habitat. This capability may contribute to nutrient turnover and the maintenance of ecosystem health, particularly in environments where nitrate is a limiting nutrient. Understanding the metabolic pathways and ecological interactions of this strain could provide insights into its contributions to biogeochemical cycles and the overall functioning of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPseudooceanicola
SpeciesPseudooceanicola nitratireducens
Strainstrain DSM 29619

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudooceanicola nitratireducens strain DSM 29619 genome assembly,

Gene Summary

Adenine Count

723621 bp

Thymine Count

732084 bp

Guanine Count

1336110 bp

Cytosine Count

1276459 bp

Genome Length

4068972 bp

Protein-coding Genes

3819 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hook-length control protein flikSAMN05421762_0083Not AvailableNegative85376 - 8797692537.3
rod binding proteinSAMN05421762_0084Not AvailablePositive88087 - 883629563.24
flgn proteinSAMN05421762_0085Not AvailablePositive88355 - 8871713348.0
predicted metal-dependent hydrolase, tim-barrel foldSAMN05421762_0087Not AvailableNegative89122 - 9014437615.6
sugar transferase involved in lps biosynthesis (colanic, teichoic acid)SAMN05421762_0088Not AvailablePositive90322 - 9103226381.6
d-alanine transaminaseSAMN05421762_0089Not AvailableNegative91132 - 9199231489.7
l-alanine-dl-glutamate epimeraseSAMN05421762_0090Not AvailableNegative92012 - 9297734246.0
uncharacterized conserved protein, nad-dependent epimerase/dehydratase familySAMN05421762_0091Not AvailableNegative93072 - 9407636020.6
beta-methylmalyl-coa/l-malyl-coa lyaseSAMN05421762_0092Not AvailablePositive94344 - 9530634590.4
hypothetical proteinSAMN05421762_0093Not AvailablePositive95504 - 9600117872.4

Displaying genes 101 – 110 of 3875 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.