Spirosoma endophyticum strain DSM 26130

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cytophagaceae

Genus

Spirosoma

Description

Spirosoma endophyticum strain DSM 26130 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain possesses true flagella, which contribute to its motility. It is classified as mesophilic, with an optimal growth temperature of 29°C, indicating that it thrives in moderate temperature conditions. The strain has a single replicon and is non-spore-forming, which suggests that it relies on its vegetative state for reproduction and survival under varying environmental conditions. The accession number for Spirosoma endophyticum strain DSM 26130 is FOLQ00000000.1, which can be used for further genetic and genomic studies. In terms of ecological significance, Spirosoma endophyticum likely plays a role in its microbial community, potentially interacting with other microorganisms in its environment. Given its aerobic nature, it may contribute to the cycling of nutrients in soil or plant-associated ecosystems. Its ability to thrive in moderate temperatures aligns with various ecological niches, allowing it to adapt to specific environments where similar mesophilic organisms are present. This adaptability and its non-spore-forming nature may influence its interactions with other species, making it a subject of interest for studies on microbial ecology and endophytic relationships.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCytophagaceae
GenusSpirosoma
SpeciesSpirosoma endophyticum
Strainstrain DSM 26130

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Spirosoma endophyticum strain DSM 26130
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Spirosoma endophyticum strain DSM 26130 genome assembly, contig:

Gene Summary

Adenine Count

2205946 bp

Thymine Count

2218418 bp

Guanine Count

2049092 bp

Cytosine Count

2038248 bp

Genome Length

8512335 bp

Protein-coding Genes

7593 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thioredoxin-likeSAMN05216167_12830Not AvailablePositive7651481 - 765196617851.9
udp-n-acetylmuramyl pentapeptide phosphotransferase/udp-n-acetylglucosamine-1-phosphate transferaseSAMN05216167_12831Not AvailableNegative7651999 - 765299136782.6
nucleoside-diphosphate-sugar epimeraseSAMN05216167_12832Not AvailableNegative7652988 - 765390233583.8
glycosyltransferase involved in cell wall bisynthesisSAMN05216167_12833Not AvailableNegative7653899 - 765511645857.5
heparinase ii/iii n-terminusSAMN05216167_12834Not AvailableNegative7655079 - 765672263047.0
predicted dehydrogenaseSAMN05216167_12835Not AvailableNegative7656719 - 765888778053.0
udp-n-acetylglucosamine 2-epimerase (non-hydrolysing)SAMN05216167_12836Not AvailableNegative7658899 - 766001441431.2
2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferaseSAMN05216167_12837Not AvailableNegative7660011 - 766072727407.3
glycosyltransferase involved in cell wall bisynthesisSAMN05216167_12838Not AvailableNegative7660730 - 766185442592.4
glycosyltransferase involved in cell wall bisynthesisSAMN05216167_12839Not AvailableNegative7661863 - 766289438933.1

Displaying genes 6711 – 6720 of 7641 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.