Verrucosispora sediminis strain CGMCC 4.3550

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Verrucosispora sediminis strain CGMCC 4.3550 is a notable actinobacterium characterized by the presence of flagella, which suggests a motile lifestyle. This strain is classified under a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The strain is cataloged in the genomic database under the accession number FOLJ00000000.1, providing a reference for researchers interested in its genetic makeup and potential applications. The presence of flagella is particularly significant as it may enhance the organism's ability to navigate its environment, potentially impacting its ecological role. Flagellated bacteria are often able to exploit different niches, enhancing their survival and competitive abilities within microbial communities. This motility may allow Verrucosispora sediminis to access nutrients more effectively or evade predation. Understanding the mobility and genomic characteristics of Verrucosispora sediminis strain CGMCC 4.3550 can provide insights into its ecological interactions and its potential applications in biotechnology or environmental microbiology. By studying this strain, researchers can explore its role within sedimentary ecosystems and its interactions with other microorganisms, contributing to a more comprehensive understanding of microbial diversity and function.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora sediminimaris
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Verrucosispora sediminis strain CGMCC 4.3550 genome assembly,

Gene Summary

Adenine Count

930806 bp

Thymine Count

926505 bp

Guanine Count

2270089 bp

Cytosine Count

2277511 bp

Genome Length

6407610 bp

Protein-coding Genes

5819 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4)SAMN05216284_11944Not AvailableNegative5593818 - 559534150108.4
inorganic pyrophosphataseSAMN05216284_11945Not AvailablePositive5595853 - 559635919285.5
type vii secretion integral membrane protein eccdSAMN05216284_11946Not AvailableNegative5596385 - 559778546282.0
dna segregation atpase ftsk/spoiiie, s-dna-t familySAMN05216284_11947Not AvailablePositive5597886 - 5601833140751.0
type vii secretion-associated serine protease mycosinSAMN05216284_11948Not AvailablePositive5601907 - 560322945401.6
undecaprenyl-diphosphataseSAMN05216284_11949Not AvailablePositive5603311 - 560403025421.3
colicin v production proteinSAMN05216284_11950Not AvailableNegative5604038 - 560520740540.6
nudix domain-containing proteinSAMN05216284_11951Not AvailableNegative5605280 - 560599025131.7
thiol-disulfide isomerase or thioredoxinSAMN05216284_11952Not AvailableNegative5605987 - 560659521605.8
dna-(apurinic or apyrimidinic site) lyase /endonuclease iiiSAMN05216284_11953Not AvailableNegative5606592 - 560737128175.0

Displaying genes 5151 – 5160 of 5881 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.