Verrucosispora sediminis strain CGMCC 4.3550

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Verrucosispora sediminis strain CGMCC 4.3550 is a notable actinobacterium characterized by the presence of flagella, which suggests a motile lifestyle. This strain is classified under a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The strain is cataloged in the genomic database under the accession number FOLJ00000000.1, providing a reference for researchers interested in its genetic makeup and potential applications. The presence of flagella is particularly significant as it may enhance the organism's ability to navigate its environment, potentially impacting its ecological role. Flagellated bacteria are often able to exploit different niches, enhancing their survival and competitive abilities within microbial communities. This motility may allow Verrucosispora sediminis to access nutrients more effectively or evade predation. Understanding the mobility and genomic characteristics of Verrucosispora sediminis strain CGMCC 4.3550 can provide insights into its ecological interactions and its potential applications in biotechnology or environmental microbiology. By studying this strain, researchers can explore its role within sedimentary ecosystems and its interactions with other microorganisms, contributing to a more comprehensive understanding of microbial diversity and function.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora sediminimaris
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Verrucosispora sediminis strain CGMCC 4.3550 genome assembly,

Gene Summary

Adenine Count

930806 bp

Thymine Count

926505 bp

Guanine Count

2270089 bp

Cytosine Count

2277511 bp

Genome Length

6407610 bp

Protein-coding Genes

5819 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
23s rrna (cytidine1920-2'-o)/16s rrna (cytidine1409-2'-o)-methyltransferaseSAMN05216284_118140Not AvailableNegative5541431 - 554229129795.8
hypothetical proteinSAMN05216284_118141Not AvailableNegative5542308 - 55425297572.8
hypothetical proteinSAMN05216284_118142Not AvailableNegative5542526 - 554311320098.1
scp-2 sterol transfer family proteinSAMN05216284_118143Not AvailablePositive5543225 - 554356312435.0
haloacid dehalogenase superfamily class (subfamily) iia/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)eSAMN05216284_118144Not AvailableNegative5543569 - 554458534478.8
hypothetical proteinSAMN05216284_118145Not AvailableNegative5544582 - 554582944076.1
mucin-5bSAMN05216284_118146Not AvailablePositive5545995 - 554692329265.8
atp-dependent clp protease atp-binding subunit clpcSAMN05216284_1191Not AvailableNegative5547379 - 554880752555.4
lsr2 proteinSAMN05216284_1192Not AvailableNegative5549245 - 554959512482.7
lysyl-trna synthetase, class iiSAMN05216284_1193Not AvailableNegative5549708 - 555121655823.8

Displaying genes 5101 – 5110 of 5881 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.