Verrucosispora sediminis strain CGMCC 4.3550

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Verrucosispora sediminis strain CGMCC 4.3550 is a notable actinobacterium characterized by the presence of flagella, which suggests a motile lifestyle. This strain is classified under a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The strain is cataloged in the genomic database under the accession number FOLJ00000000.1, providing a reference for researchers interested in its genetic makeup and potential applications. The presence of flagella is particularly significant as it may enhance the organism's ability to navigate its environment, potentially impacting its ecological role. Flagellated bacteria are often able to exploit different niches, enhancing their survival and competitive abilities within microbial communities. This motility may allow Verrucosispora sediminis to access nutrients more effectively or evade predation. Understanding the mobility and genomic characteristics of Verrucosispora sediminis strain CGMCC 4.3550 can provide insights into its ecological interactions and its potential applications in biotechnology or environmental microbiology. By studying this strain, researchers can explore its role within sedimentary ecosystems and its interactions with other microorganisms, contributing to a more comprehensive understanding of microbial diversity and function.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora sediminimaris
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Verrucosispora sediminis strain CGMCC 4.3550 genome assembly,

Gene Summary

Adenine Count

930806 bp

Thymine Count

926505 bp

Guanine Count

2270089 bp

Cytosine Count

2277511 bp

Genome Length

6407610 bp

Protein-coding Genes

5819 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diguanylate cyclase (ggdef) domain-containing proteinSAMN05216284_109245Not AvailableNegative3568587 - 357013755415.8
release factor glutamine methyltransferaseSAMN05216284_109246Not AvailablePositive3570304 - 357117330439.1
trna threonylcarbamoyl adenosine modification protein, sua5/ycio/yrdc/ywlc familySAMN05216284_109247Not AvailablePositive3571173 - 357181722761.3
protein-tyrosine phosphataseSAMN05216284_109248Not AvailablePositive3571818 - 357242921641.6
membrane carboxypeptidase (penicillin-binding protein)SAMN05216284_109249Not AvailablePositive3572525 - 357463975328.9
uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domainsSAMN05216284_109250Not AvailableNegative3574661 - 357612753254.9
glycine hydroxymethyltransferaseSAMN05216284_109251Not AvailablePositive3576174 - 357746045281.0
atp synthase protein iSAMN05216284_109252Not AvailablePositive3577457 - 357792715580.4
hypothetical proteinSAMN05216284_109253Not AvailablePositive3578093 - 35783147511.31
f-type h+-transporting atpase subunit aSAMN05216284_109254Not AvailablePositive3578357 - 357913628808.2

Displaying genes 3301 – 3310 of 5881 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.