Verrucosispora sediminis strain CGMCC 4.3550

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Verrucosispora sediminis strain CGMCC 4.3550 is a notable actinobacterium characterized by the presence of flagella, which suggests a motile lifestyle. This strain is classified under a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The strain is cataloged in the genomic database under the accession number FOLJ00000000.1, providing a reference for researchers interested in its genetic makeup and potential applications. The presence of flagella is particularly significant as it may enhance the organism's ability to navigate its environment, potentially impacting its ecological role. Flagellated bacteria are often able to exploit different niches, enhancing their survival and competitive abilities within microbial communities. This motility may allow Verrucosispora sediminis to access nutrients more effectively or evade predation. Understanding the mobility and genomic characteristics of Verrucosispora sediminis strain CGMCC 4.3550 can provide insights into its ecological interactions and its potential applications in biotechnology or environmental microbiology. By studying this strain, researchers can explore its role within sedimentary ecosystems and its interactions with other microorganisms, contributing to a more comprehensive understanding of microbial diversity and function.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora sediminimaris
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Verrucosispora sediminis strain CGMCC 4.3550


Gene Summary

Adenine Count

930806 bp

Thymine Count

926505 bp

Guanine Count

2270089 bp

Cytosine Count

2277511 bp

Genome Length

6407610 bp

Protein-coding Genes

5819 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phospho-n-acetylmuramoyl-pentapeptide- transferaseSAMN05216284_10118Not AvailableNegative16289 - 1740739364.0
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseSAMN05216284_10119Not AvailableNegative17419 - 1884648575.1
udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligaseSAMN05216284_10120Not AvailableNegative18843 - 2036051319.8
cell division protein ftsi (penicillin-binding protein 3)SAMN05216284_10121Not AvailableNegative20446 - 2267178951.7
septum formation initiatorSAMN05216284_10122Not AvailableNegative22675 - 2328021255.5
16s rrna (cytosine1402-n4)-methyltransferaseSAMN05216284_10123Not AvailableNegative23277 - 2446743216.2
mraz proteinSAMN05216284_10124Not AvailableNegative24594 - 2502516039.1
udp-n-acetylmuramyl tripeptide synthaseSAMN05216284_10125Not AvailablePositive25325 - 2662946988.0
hypothetical proteinSAMN05216284_10126Not AvailablePositive26619 - 2733825299.1
uncharacterized membrane protein ydjx, tvp38/tmem64 family, snare-associated domainSAMN05216284_10127Not AvailablePositive27335 - 2811126887.5

Displaying genes 21 – 30 of 5881 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.