Verrucosispora sediminis strain CGMCC 4.3550

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Verrucosispora sediminis strain CGMCC 4.3550 is a notable actinobacterium characterized by the presence of flagella, which suggests a motile lifestyle. This strain is classified under a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The strain is cataloged in the genomic database under the accession number FOLJ00000000.1, providing a reference for researchers interested in its genetic makeup and potential applications. The presence of flagella is particularly significant as it may enhance the organism's ability to navigate its environment, potentially impacting its ecological role. Flagellated bacteria are often able to exploit different niches, enhancing their survival and competitive abilities within microbial communities. This motility may allow Verrucosispora sediminis to access nutrients more effectively or evade predation. Understanding the mobility and genomic characteristics of Verrucosispora sediminis strain CGMCC 4.3550 can provide insights into its ecological interactions and its potential applications in biotechnology or environmental microbiology. By studying this strain, researchers can explore its role within sedimentary ecosystems and its interactions with other microorganisms, contributing to a more comprehensive understanding of microbial diversity and function.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora sediminimaris
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Verrucosispora sediminis strain CGMCC 4.3550 genome assembly,

Gene Summary

Adenine Count

930806 bp

Thymine Count

926505 bp

Guanine Count

2270089 bp

Cytosine Count

2277511 bp

Genome Length

6407610 bp

Protein-coding Genes

5819 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domainSAMN05216284_10565Not AvailableNegative2011171 - 201211834226.2
uncharacterized conserved proteinSAMN05216284_10566Not AvailablePositive2012225 - 201330137162.3
peptidoglycan/xylan/chitin deacetylase, pgda/cda1 familySAMN05216284_10567Not AvailableNegative2013398 - 201406623907.6
endo-1,4-beta-xylanaseSAMN05216284_10568Not AvailableNegative2014161 - 201536044410.6
xylan 1,4-beta-xylosidaseSAMN05216284_10569Not AvailableNegative2015780 - 201740259990.1
raffinose/stachyose/melibiose transport system substrate-binding proteinSAMN05216284_10570Not AvailablePositive2017656 - 201894846360.1
laci family transcriptional regulatorSAMN05216284_10571Not AvailablePositive2019048 - 20191895019.03
laci family transcriptional regulatorSAMN05216284_10572Not AvailablePositive2020944 - 20211537528.08
nucleoside-diphosphate-sugar epimeraseSAMN05216284_10573Not AvailablePositive2021596 - 202262436075.1
hypothetical proteinSAMN05216284_10574Not AvailableNegative2022637 - 202361135074.9

Displaying genes 1851 – 1860 of 5881 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.