Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional antiterminator rfah | SAMN04488094_101819 | Not Available | Positive | 870566 - 871099 | 20051.3 |
| glycosyltransferase | SAMN04488094_101820 | Not Available | Positive | 871270 - 872031 | 27932.9 |
| gdpmannose 4,6-dehydratase | SAMN04488094_101821 | Not Available | Positive | 872028 - 873149 | 42168.3 |
| gdp-l-fucose synthase | SAMN04488094_101822 | Not Available | Positive | 873157 - 874119 | 35432.1 |
| dna-binding regulatory protein, yebc/pmpr family | SAMN04488094_101823 | Not Available | Negative | 874191 - 874931 | 26778.1 |
| uncharacterized conserved protein, duf2252 family | SAMN04488094_101824 | Not Available | Positive | 875130 - 876572 | 54021.7 |
| glycosyl hydrolases family 16 | SAMN04488094_101825 | Not Available | Positive | 876779 - 877933 | 42829.6 |
| glycosyl hydrolases family 16 | SAMN04488094_101826 | Not Available | Positive | 878253 - 878698 | 17032.1 |
| phage tail tape measure protein, lambda family | SAMN04488094_1021 | Not Available | Negative | 878699 - 881043 | 79196.3 |
| hypothetical protein | SAMN04488094_1022 | Not Available | Negative | 881036 - 881194 | 5302.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
