Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione peroxidase | SAMN04488094_101769 | Not Available | Negative | 805779 - 806309 | 19147.7 |
| predicted unusual protein kinase regulating ubiquinone biosynthesis, aarf/abc1/ubib family | SAMN04488094_101770 | Not Available | Negative | 806372 - 807688 | 48163.1 |
| alcohol dehydrogenase, class iv | SAMN04488094_101771 | Not Available | Positive | 807848 - 808996 | 39053.3 |
| hypothetical protein | SAMN04488094_101772 | Not Available | Negative | 809018 - 810280 | 46386.6 |
| membrane glycosyltransferase | SAMN04488094_101773 | Not Available | Negative | 810267 - 812057 | 64610.1 |
| hypothetical protein | SAMN04488094_101774 | Not Available | Negative | 812084 - 812272 | 7247.63 |
| glucans biosynthesis protein | SAMN04488094_101775 | Not Available | Negative | 812257 - 813765 | 55704.5 |
| hypothetical protein | SAMN04488094_101776 | Not Available | Positive | 814301 - 815002 | 23910.7 |
| glucoamylase | SAMN04488094_101777 | Not Available | Positive | 815062 - 816312 | 45251.9 |
| hypothetical protein | SAMN04488094_101778 | Not Available | Negative | 816288 - 817535 | 45413.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
