Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf domain-containing protein | SAMN04488094_101739 | Not Available | Positive | 774342 - 775343 | 35996.4 |
| aldehyde dehydrogenase | SAMN04488094_101740 | Not Available | Positive | 775451 - 776974 | 55716.3 |
| antibiotic biosynthesis monooxygenase | SAMN04488094_101741 | Not Available | Positive | 777211 - 777507 | 11250.7 |
| porin | SAMN04488094_101742 | Not Available | Positive | 777710 - 778201 | 17376.3 |
| hypothetical protein | SAMN04488094_101743 | Not Available | Positive | 778214 - 778456 | 8185.35 |
| helix-turn-helix domain-containing protein | SAMN04488094_101744 | Not Available | Negative | 778508 - 779695 | 43841.3 |
| hypothetical protein | SAMN04488094_101745 | Not Available | Positive | 779862 - 780155 | 11142.6 |
| trimethylamine---corrinoid protein co-methyltransferase | SAMN04488094_101746 | Not Available | Negative | 780193 - 781725 | 55011.5 |
| gmp synthase (glutamine-hydrolyzing) | SAMN04488094_101747 | Not Available | Positive | 781901 - 783466 | 57362.4 |
| eama domain-containing membrane protein rard | SAMN04488094_101748 | Not Available | Positive | 783851 - 784612 | 26782.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
