Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_101662 | Not Available | Positive | 696866 - 698578 | 60438.3 |
| multidrug resistance efflux pump | SAMN04488094_101663 | Not Available | Positive | 698593 - 699666 | 38208.1 |
| cyclic nucleotide-binding domain-containing protein | SAMN04488094_101664 | Not Available | Negative | 700398 - 701168 | 28230.2 |
| crp-like helix-turn-helix domain-containing protein | SAMN04488094_101665 | Not Available | Positive | 701510 - 702307 | 29484.3 |
| osmotically-inducible protein osmy, contains bon domain | SAMN04488094_101666 | Not Available | Negative | 702334 - 702981 | 23225.4 |
| cell division protease ftsh | SAMN04488094_101667 | Not Available | Positive | 703384 - 705324 | 69655.3 |
| universal stress protein family protein | SAMN04488094_101668 | Not Available | Negative | 705382 - 706206 | 29300.0 |
| uncharacterized membrane protein ycap, duf421 family | SAMN04488094_101669 | Not Available | Negative | 706360 - 706851 | 17798.1 |
| predicted dithiol-disulfide isomerase, dsba family | SAMN04488094_101670 | Not Available | Positive | 707016 - 707657 | 23531.9 |
| mfs transporter, dha1 family, bicyclomycin/chloramphenicol resistance protein | SAMN04488094_101671 | Not Available | Positive | 707772 - 708986 | 42231.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
