Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase | SAMN04488094_101614 | Not Available | Negative | 661503 - 662720 | 43201.4 |
| aspartate/methionine/tyrosine aminotransferase | SAMN04488094_101615 | Not Available | Negative | 662813 - 663952 | 41020.1 |
| protein-disulfide isomerase | SAMN04488094_101616 | Not Available | Positive | 664236 - 664988 | 27311.2 |
| hypothetical protein | SAMN04488094_101617 | Not Available | Positive | 665085 - 665510 | 14919.3 |
| multidrug resistance efflux pump | SAMN04488094_101618 | Not Available | Positive | 665515 - 666747 | 45168.9 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SAMN04488094_101619 | Not Available | Negative | 666803 - 667930 | 40122.0 |
| protein rodz, contains xre-like hth and duf4115 domains | SAMN04488094_101620 | Not Available | Negative | 668033 - 669340 | 46093.4 |
| 5-aminolevulinate synthase | SAMN04488094_101621 | Not Available | Negative | 669455 - 670690 | 45039.2 |
| hypothetical protein | SAMN04488094_101622 | Not Available | Negative | 670812 - 671402 | 20243.3 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN04488094_101623 | Not Available | Positive | 671524 - 672909 | 50402.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
