Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asma-like c-terminal region | SAMN04488094_101604 | Not Available | Negative | 646952 - 650365 | 119172.0 |
| peroxiredoxin q/bcp | SAMN04488094_101605 | Not Available | Positive | 650462 - 650923 | 16661.9 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN04488094_101606 | Not Available | Positive | 651307 - 652629 | 48748.8 |
| protein ccma, bactofilin family | SAMN04488094_101607 | Not Available | Positive | 652619 - 653122 | 17305.4 |
| hypothetical protein | SAMN04488094_101608 | Not Available | Positive | 653257 - 654654 | 53080.9 |
| uncharacterized membrane protein | SAMN04488094_101609 | Not Available | Negative | 654691 - 655506 | 29634.8 |
| membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, elab/yqjd/duf883 family | SAMN04488094_101610 | Not Available | Negative | 655602 - 655922 | 11670.9 |
| bacterial peptide chain release factor 2 (brf-2) | SAMN04488094_101611 | Not Available | Negative | 656063 - 657187 | 41451.3 |
| uncharacterized membrane protein yjjp, duf1212 family | SAMN04488094_101612 | Not Available | Negative | 657260 - 658531 | 44071.6 |
| penicillin-binding protein 1a | SAMN04488094_101613 | Not Available | Negative | 658676 - 661198 | 92284.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
