Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holin of 3tms, for gene-transfer release | SAMN04488094_101564 | Not Available | Negative | 605955 - 606554 | 21109.3 |
| predicted peptidoglycan domain-containing protein | SAMN04488094_101565 | Not Available | Negative | 606545 - 607156 | 22499.8 |
| phosphohistidine phosphatase sixa | SAMN04488094_101566 | Not Available | Negative | 607256 - 607765 | 17554.1 |
| cytochrome c-type biogenesis protein ccme | SAMN04488094_101567 | Not Available | Negative | 607809 - 608270 | 16203.5 |
| n-acetyl-gamma-glutamyl-phosphate reductase | SAMN04488094_101568 | Not Available | Negative | 608302 - 609330 | 36560.0 |
| glutamate racemase | SAMN04488094_101569 | Not Available | Negative | 609384 - 610196 | 29415.3 |
| putative hemolysin | SAMN04488094_101570 | Not Available | Negative | 610196 - 611101 | 33611.8 |
| transcriptional regulator, lysr family | SAMN04488094_101571 | Not Available | Positive | 611553 - 612464 | 34374.1 |
| transglycosylase slt domain-containing protein | SAMN04488094_101572 | Not Available | Positive | 612772 - 613572 | 28362.6 |
| putative intracellular protease/amidase | SAMN04488094_101573 | Not Available | Negative | 613636 - 614310 | 23829.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
