Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock dna-binding protein family | SAMN04488094_101534 | Not Available | Negative | 575700 - 576239 | 19483.3 |
| pyridoxamine 5'-phosphate oxidase | SAMN04488094_101535 | Not Available | Negative | 576472 - 577074 | 22371.4 |
| enoyl-[acyl-carrier-protein] reductase | SAMN04488094_101536 | Not Available | Positive | 577220 - 578032 | 28813.5 |
| xanthine phosphoribosyltransferase | SAMN04488094_101537 | Not Available | Positive | 578040 - 578555 | 19460.3 |
| peptidyl-prolyl cis-trans isomerase d | SAMN04488094_101538 | Not Available | Positive | 578932 - 580779 | 66059.0 |
| anthranilate synthase, component i | SAMN04488094_101539 | Not Available | Positive | 580786 - 582300 | 55107.7 |
| uncharacterized membrane protein ydjx, tvp38/tmem64 family, snare-associated domain | SAMN04488094_101540 | Not Available | Positive | 582380 - 583117 | 25447.9 |
| acetyltransferase (gnat) family protein | SAMN04488094_101541 | Not Available | Negative | 583095 - 583541 | 15917.1 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN04488094_101542 | Not Available | Negative | 583659 - 584363 | 25841.1 |
| cardiolipin synthase | SAMN04488094_101543 | Not Available | Negative | 584397 - 585809 | 52635.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
