Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative metalloprotease | SAMN04488094_101524 | Not Available | Positive | 563895 - 564593 | 25496.0 |
| predicted purr-regulated permease perm | SAMN04488094_101525 | Not Available | Positive | 564699 - 565862 | 40953.3 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04488094_101526 | Not Available | Negative | 565813 - 567033 | 43439.0 |
| exodeoxyribonuclease-3 | SAMN04488094_101527 | Not Available | Positive | 567178 - 567960 | 29292.5 |
| hypothetical protein | SAMN04488094_101528 | Not Available | Positive | 568145 - 568732 | 20916.5 |
| ribonucleoside-diphosphate reductase class ii | SAMN04488094_101529 | Not Available | Negative | 568970 - 572653 | 133486.0 |
| Trna-pro | Not Available | Not Available | Positive | 573384 - 573460 | Not Available |
| hypothetical protein | SAMN04488094_101530 | Not Available | Positive | 573515 - 573694 | 6483.12 |
| mannose-1-phosphate guanylyltransferase (gdp) /mannose-6-phosphate isomerase, type 2 | SAMN04488094_101532 | Not Available | Positive | 573724 - 575145 | 51706.2 |
| hypothetical protein | SAMN04488094_101533 | Not Available | Negative | 575221 - 575700 | 16767.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
