Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrogen regulatory protein p-ii family | SAMN04488094_101504 | Not Available | Positive | 545650 - 545988 | 12269.8 |
| l-glutamine synthetase | SAMN04488094_101505 | Not Available | Positive | 546046 - 547452 | 52554.0 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN04488094_101506 | Not Available | Positive | 547606 - 548859 | 46106.1 |
| predicted small metal-binding protein | SAMN04488094_101507 | Not Available | Negative | 548929 - 549102 | 6290.51 |
| hypothetical protein | SAMN04488094_101508 | Not Available | Positive | 549353 - 550234 | 32384.4 |
| uncharacterized conserved protein yafd, endonuclease/exonuclease/phosphatase (eep) superfamily | SAMN04488094_101509 | Not Available | Negative | 550281 - 551177 | 32593.0 |
| putative redox protein | SAMN04488094_101510 | Not Available | Positive | 551295 - 552500 | 43130.5 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN04488094_101511 | Not Available | Negative | 552528 - 553418 | 31587.8 |
| purine nucleosidase | SAMN04488094_101512 | Not Available | Positive | 553818 - 554762 | 33780.8 |
| grpb domain, predicted nucleotidyltransferase, upf0157 family | SAMN04488094_101513 | Not Available | Positive | 554759 - 555262 | 18426.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
