Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps-assembly protein | SAMN04488094_101494 | Not Available | Positive | 533574 - 535796 | 83525.4 |
| periplasmic chaperone for outer membrane proteins sura | SAMN04488094_101495 | Not Available | Positive | 535894 - 537117 | 43957.8 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMN04488094_101496 | Not Available | Positive | 537114 - 538112 | 34571.8 |
| dimethyladenosine transferase | SAMN04488094_101497 | Not Available | Positive | 538219 - 539070 | 30297.8 |
| protein of unknown function | SAMN04488094_101498 | Not Available | Negative | 539266 - 539844 | 21100.4 |
| [protein release factor]-glutamine n5-methyltransferase | SAMN04488094_101499 | Not Available | Negative | 540185 - 541009 | 29595.1 |
| bacterial peptide chain release factor 1 (brf-1) | SAMN04488094_101500 | Not Available | Negative | 541006 - 542061 | 38589.9 |
| protein of unknown function | SAMN04488094_101501 | Not Available | Negative | 542113 - 542592 | 17088.4 |
| atp diphosphatase | SAMN04488094_101502 | Not Available | Positive | 542718 - 543530 | 30388.7 |
| yjef c-terminal region, hydroxyethylthiazole kinase-related/yjef n-terminal region | SAMN04488094_101503 | Not Available | Negative | 543851 - 545443 | 55395.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
