Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| invasion protein ialb, involved in pathogenesis | SAMN04488094_101474 | Not Available | Positive | 510961 - 511680 | 24903.2 |
| 3-oxoacyl-[acyl-carrier-protein] synthase ii | SAMN04488094_101475 | Not Available | Negative | 511859 - 513067 | 42637.0 |
| acyl carrier protein | SAMN04488094_101476 | Not Available | Negative | 513064 - 513333 | 9485.05 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | SAMN04488094_101477 | Not Available | Negative | 513369 - 514460 | 37123.5 |
| murein l,d-transpeptidase ycbb/ykud | SAMN04488094_101478 | Not Available | Negative | 514570 - 516174 | 59024.8 |
| uncharacterized conserved protein ycbk, duf882 family | SAMN04488094_101479 | Not Available | Positive | 516524 - 517099 | 20883.0 |
| hypothetical protein | SAMN04488094_101480 | Not Available | Positive | 517632 - 517973 | 12155.7 |
| transcriptional regulator, asnc family | SAMN04488094_101481 | Not Available | Negative | 517983 - 518450 | 17067.7 |
| l-proline dehydrogenase /delta-1-pyrroline-5-carboxylate dehydrogenase | SAMN04488094_101482 | Not Available | Positive | 518573 - 522028 | 122663.0 |
| hypothetical protein | SAMN04488094_101483 | Not Available | Positive | 522198 - 523283 | 37292.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
