Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| [citrate (pro-3s)-lyase] ligase | SAMN04488094_101464 | Not Available | Positive | 497307 - 498386 | 40891.5 |
| citrate lyase subunit gamma (acyl carrier protein) | SAMN04488094_101465 | Not Available | Positive | 498429 - 498722 | 10507.6 |
| citrate lyase subunit beta / citryl-coa lyase | SAMN04488094_101466 | Not Available | Positive | 498719 - 499591 | 31443.7 |
| citrate lyase subunit alpha / citrate coa-transferase | SAMN04488094_101467 | Not Available | Positive | 499605 - 501122 | 53795.6 |
| triphosphoribosyl-dephospho-coa synthase | SAMN04488094_101468 | Not Available | Positive | 501224 - 502075 | 29845.9 |
| holo-acp synthase | SAMN04488094_101469 | Not Available | Positive | 502062 - 502622 | 20389.4 |
| hypothetical protein | SAMN04488094_101470 | Not Available | Positive | 502680 - 503294 | 22356.4 |
| methionine synthase (b12-dependent) | SAMN04488094_101471 | Not Available | Positive | 503461 - 507210 | 135951.0 |
| dna polymerase-4 | SAMN04488094_101472 | Not Available | Positive | 507438 - 508691 | 45976.7 |
| hypothetical protein | SAMN04488094_101473 | Not Available | Negative | 508887 - 510434 | 55651.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
