Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_101454 | Not Available | Negative | 485168 - 486067 | 31475.8 |
| monosaccharide abc transporter substrate-binding protein, cut2 family (tc 3.a.1.2.-) | SAMN04488094_101455 | Not Available | Positive | 487029 - 487967 | 32965.5 |
| monosaccharide abc transporter atp-binding protein, cut2 family (tc 3.a.1.2.-) | SAMN04488094_101456 | Not Available | Positive | 488081 - 489649 | 56743.2 |
| ribose transport system permease protein | SAMN04488094_101457 | Not Available | Positive | 489646 - 490605 | 33129.3 |
| 3-hexulose-6-phosphate isomerase | SAMN04488094_101458 | Not Available | Negative | 490667 - 491215 | 19094.2 |
| xylose isomerase-like tim barrel | SAMN04488094_101459 | Not Available | Positive | 491386 - 492267 | 33012.4 |
| hypothetical protein | SAMN04488094_101460 | Not Available | Negative | 492289 - 493839 | 54827.1 |
| glutamate synthase domain-containing protein 2 | SAMN04488094_101461 | Not Available | Negative | 493923 - 495572 | 59233.7 |
| cysteine-rich secretory protein family protein | SAMN04488094_101462 | Not Available | Negative | 495684 - 496550 | 29876.5 |
| uncharacterized protein, upf0303 family | SAMN04488094_101463 | Not Available | Positive | 496698 - 497168 | 16628.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
