Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, laci family | SAMN04488094_101434 | Not Available | Positive | 460861 - 461904 | 37571.8 |
| gxwxg protein | SAMN04488094_101435 | Not Available | Positive | 462053 - 462619 | 20693.7 |
| hypothetical protein | SAMN04488094_101436 | Not Available | Positive | 462641 - 463432 | 27496.3 |
| transcriptional regulator, tetr family | SAMN04488094_101437 | Not Available | Positive | 463500 - 464063 | 20613.0 |
| iron(iii) transport system atp-binding protein | SAMN04488094_101438 | Not Available | Negative | 464123 - 465175 | 37899.8 |
| iron(iii) transport system permease protein | SAMN04488094_101439 | Not Available | Negative | 465191 - 467347 | 76972.4 |
| iron(iii) transport system substrate-binding protein | SAMN04488094_101440 | Not Available | Negative | 467417 - 468448 | 36395.9 |
| two component transcriptional regulator, winged helix family | SAMN04488094_101441 | Not Available | Positive | 468690 - 469421 | 26924.6 |
| signal transduction histidine kinase | SAMN04488094_101442 | Not Available | Positive | 469418 - 471904 | 88590.8 |
| abc-type multidrug transport system, atpase and permease component | SAMN04488094_101443 | Not Available | Positive | 472578 - 474392 | 66093.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
