Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, laci family | SAMN04488094_101424 | Not Available | Negative | 449158 - 450204 | 37845.5 |
| sugar or nucleoside kinase, ribokinase family | SAMN04488094_101425 | Not Available | Positive | 450720 - 451658 | 33053.6 |
| aldose 1-epimerase | SAMN04488094_101426 | Not Available | Positive | 451713 - 452720 | 36506.0 |
| d-sorbitol dehydrogenase (acceptor) | SAMN04488094_101427 | Not Available | Positive | 452806 - 453576 | 27210.6 |
| alcohol dehydrogenase, class iv | SAMN04488094_101428 | Not Available | Positive | 453875 - 455044 | 41668.8 |
| ribose transport system atp-binding protein | SAMN04488094_101429 | Not Available | Positive | 455154 - 456704 | 56457.9 |
| monosaccharide abc transporter membrane protein, cut2 family (tc 3.a.1.2.-) | SAMN04488094_101430 | Not Available | Positive | 456730 - 457749 | 34782.9 |
| ribose transport system substrate-binding protein | SAMN04488094_101431 | Not Available | Positive | 457975 - 458919 | 33119.2 |
| tagatose-bisphosphate aldolase noncatalytic subunit | SAMN04488094_101432 | Not Available | Positive | 459084 - 460334 | 45520.9 |
| l-fucose mutarotase | SAMN04488094_101433 | Not Available | Positive | 460353 - 460787 | 15875.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
