Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, ntrc family, nitrogen regulation response regulator glng | SAMN04488094_101394 | Not Available | Negative | 418686 - 420059 | 50071.6 |
| two-component system, ntrc family, nitrogen regulation sensor histidine kinase glnl | SAMN04488094_101395 | Not Available | Negative | 420063 - 421151 | 39654.8 |
| pp_00390 | SAMN04488094_101396 | Not Available | Negative | 421151 - 422158 | Not Available |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SAMN04488094_101397 | Not Available | Positive | 422330 - 423511 | 40666.5 |
| phosphatidylglycerophosphatase a | SAMN04488094_101398 | Not Available | Positive | 423508 - 424008 | 18086.2 |
| nicotinamide-nucleotide amidase | SAMN04488094_101399 | Not Available | Positive | 424112 - 424675 | 19497.4 |
| hypothetical protein | SAMN04488094_101400 | Not Available | Positive | 424810 - 425439 | 22093.1 |
| coenzyme q-binding protein coq10 | SAMN04488094_101401 | Not Available | Negative | 425436 - 425879 | 16805.1 |
| hypoxanthine phosphoribosyltransferase | SAMN04488094_101402 | Not Available | Positive | 425965 - 426528 | 20933.0 |
| Trna-gln | Not Available | Not Available | Positive | 426787 - 426861 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
