Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | SAMN04488094_101384 | Not Available | Negative | 405931 - 406884 | 33650.0 |
| transcriptional regulator, tetr family | SAMN04488094_101385 | Not Available | Negative | 406884 - 407642 | 27862.6 |
| cytochrome c | SAMN04488094_101386 | Not Available | Negative | 407659 - 408501 | 29743.2 |
| o-acetylhomoserine sulfhydrylase | SAMN04488094_101387 | Not Available | Positive | 408754 - 410046 | 45651.3 |
| gtp-binding protein hflx | SAMN04488094_101388 | Not Available | Negative | 410143 - 411279 | 41645.7 |
| rna-binding protein hfq | SAMN04488094_101389 | Not Available | Negative | 411423 - 411656 | 8789.7 |
| trk system potassium uptake protein trkh | SAMN04488094_101390 | Not Available | Negative | 411818 - 413341 | 53712.4 |
| trk system potassium uptake protein trka | SAMN04488094_101391 | Not Available | Negative | 413355 - 414731 | 50227.4 |
| two-component system, ntrc family, nitrogen regulation response regulator ntrx | SAMN04488094_101392 | Not Available | Negative | 414890 - 416302 | 51906.2 |
| two-component system, ntrc family, nitrogen regulation sensor histidine kinase ntry | SAMN04488094_101393 | Not Available | Negative | 416327 - 418573 | 82496.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
