Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cbs domain-containing protein | SAMN04488094_101374 | Not Available | Positive | 395369 - 395890 | 19308.2 |
| carbohydrate abc transporter atp-binding protein, cut1 family (tc 3.a.1.1.-) | SAMN04488094_101375 | Not Available | Negative | 395940 - 397088 | 41496.8 |
| alpha-1,4-digalacturonate transport system permease protein | SAMN04488094_101376 | Not Available | Negative | 397099 - 398151 | 39267.4 |
| alpha-1,4-digalacturonate transport system permease protein | SAMN04488094_101377 | Not Available | Negative | 398144 - 399115 | 36165.2 |
| alpha-1,4-digalacturonate transport system substrate-binding protein | SAMN04488094_101378 | Not Available | Negative | 399338 - 400609 | 45090.5 |
| predicted dehydrogenase | SAMN04488094_101379 | Not Available | Negative | 400606 - 401715 | 39836.0 |
| predicted dehydrogenase | SAMN04488094_101380 | Not Available | Negative | 401712 - 402731 | 37161.2 |
| predicted dehydrogenase | SAMN04488094_101381 | Not Available | Negative | 402735 - 403778 | 36544.5 |
| abc-2 type transport system permease protein | SAMN04488094_101382 | Not Available | Negative | 403872 - 405005 | 41638.9 |
| abc-2 type transport system atp-binding protein | SAMN04488094_101383 | Not Available | Negative | 405002 - 405934 | 33981.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
