Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna um-2552 2'-o-methyltransferase | SAMN04488094_101344 | Not Available | Negative | 367135 - 367860 | 25730.8 |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN04488094_101345 | Not Available | Negative | 367976 - 369088 | 40754.3 |
| virulence factor | SAMN04488094_101346 | Not Available | Positive | 369355 - 369651 | 10760.7 |
| methylenetetrahydrofolate reductase (nadph) | SAMN04488094_101347 | Not Available | Positive | 369678 - 370604 | 33052.9 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN04488094_101348 | Not Available | Positive | 370613 - 371263 | 23459.8 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | SAMN04488094_101349 | Not Available | Positive | 371268 - 372218 | 33670.5 |
| uncharacterized 2fe-2 and 4fe-4s clusters-containing protein, contains duf4445 domain | SAMN04488094_101350 | Not Available | Positive | 372513 - 374561 | 71572.8 |
| Trna-gly | Not Available | Not Available | Positive | 374697 - 374770 | Not Available |
| hypothetical protein | SAMN04488094_101352 | Not Available | Positive | 374887 - 375120 | 8913.73 |
| acyl-coa thioester hydrolase | SAMN04488094_101353 | Not Available | Positive | 375165 - 375638 | 17897.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
