Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh dehydrogenase subunit l | SAMN04488094_101324 | Not Available | Negative | 349942 - 352116 | 78727.6 |
| nadh dehydrogenase subunit k | SAMN04488094_101325 | Not Available | Negative | 352123 - 352428 | 10934.9 |
| nadh dehydrogenase subunit j | SAMN04488094_101326 | Not Available | Negative | 352547 - 353164 | 22250.4 |
| 4-carboxymuconolactone decarboxylase | SAMN04488094_101327 | Not Available | Negative | 353168 - 353569 | 14288.5 |
| nadh dehydrogenase subunit i | SAMN04488094_101328 | Not Available | Negative | 353566 - 354060 | 18896.7 |
| nadh dehydrogenase subunit h | SAMN04488094_101329 | Not Available | Negative | 354064 - 355101 | 38325.0 |
| hypothetical protein | SAMN04488094_101330 | Not Available | Negative | 355117 - 355518 | 14013.5 |
| nadh dehydrogenase subunit g | SAMN04488094_101331 | Not Available | Negative | 355524 - 357545 | 72341.1 |
| hypothetical protein | SAMN04488094_101332 | Not Available | Negative | 358278 - 358712 | 15924.2 |
| hypothetical protein | SAMN04488094_101333 | Not Available | Negative | 358848 - 358991 | 4961.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
