Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial peptide chain release factor 3 (brf-3) | SAMN04488094_101314 | Not Available | Positive | 337200 - 338807 | 59871.9 |
| hypothetical protein | SAMN04488094_101315 | Not Available | Positive | 338895 - 339509 | 22936.6 |
| uncharacterized conserved protein | SAMN04488094_101316 | Not Available | Positive | 339578 - 340195 | 21933.9 |
| atp-dependent rna helicase rhle | SAMN04488094_101317 | Not Available | Positive | 340362 - 341825 | 53822.6 |
| selenophosphate synthase | SAMN04488094_101318 | Not Available | Positive | 342073 - 343137 | 36048.4 |
| ribonuclease j | SAMN04488094_101319 | Not Available | Negative | 343316 - 344986 | 60112.0 |
| type iii pantothenate kinase | SAMN04488094_101320 | Not Available | Negative | 344987 - 345760 | 28204.1 |
| bira family transcriptional regulator, biotin operon repressor / biotin-[acetyl-coa-carboxylase] ligase | SAMN04488094_101321 | Not Available | Negative | 345942 - 346751 | 28346.8 |
| nadh dehydrogenase subunit n | SAMN04488094_101322 | Not Available | Negative | 346940 - 348385 | 50811.1 |
| nadh dehydrogenase subunit m | SAMN04488094_101323 | Not Available | Negative | 348387 - 349937 | 56584.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
