Tropicimonas isoalkanivorans strain DSM 19548

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Tropicimonas

Description

Tropicimonas isoalkanivorans strain DSM 19548 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain is mesophilic, with an optimal growth temperature of 37°C, indicating its preference for moderate temperature environments. It possesses a single replicon, which is relevant for its genetic stability and replication processes. The strain is cataloged under the accession number FOLG00000000.1, which facilitates its identification and classification in microbial databases. Its aerobic nature suggests that it relies on oxygen for metabolic processes, which is a key characteristic for understanding its ecological role. In a broader biological context, the characteristics of Tropicimonas isoalkanivorans, particularly its mesophilic nature and aerobic metabolism, may imply its adaptation to specific environmental niches where oxygen is available, such as soil or aquatic ecosystems. The ability to thrive at 37°C could also indicate its potential interactions with other organisms in warmer habitats, possibly influencing nutrient cycling and energy flow within those environments. Further research into its ecological role could provide insights into its contributions to microbial communities and ecosystem function.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusTropicimonas
SpeciesTropicimonas isoalkanivorans
Strainstrain DSM 19548

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tropicimonas isoalkanivorans strain DSM 19548


Gene Summary

Adenine Count

883330 bp

Thymine Count

875776 bp

Guanine Count

1590237 bp

Cytosine Count

1626123 bp

Genome Length

4976641 bp

Protein-coding Genes

4685 genes

Non-Coding Genes

175 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bacterial peptide chain release factor 3 (brf-3)SAMN04488094_101314Not AvailablePositive337200 - 33880759871.9
hypothetical proteinSAMN04488094_101315Not AvailablePositive338895 - 33950922936.6
uncharacterized conserved proteinSAMN04488094_101316Not AvailablePositive339578 - 34019521933.9
atp-dependent rna helicase rhleSAMN04488094_101317Not AvailablePositive340362 - 34182553822.6
selenophosphate synthaseSAMN04488094_101318Not AvailablePositive342073 - 34313736048.4
ribonuclease jSAMN04488094_101319Not AvailableNegative343316 - 34498660112.0
type iii pantothenate kinaseSAMN04488094_101320Not AvailableNegative344987 - 34576028204.1
bira family transcriptional regulator, biotin operon repressor / biotin-[acetyl-coa-carboxylase] ligaseSAMN04488094_101321Not AvailableNegative345942 - 34675128346.8
nadh dehydrogenase subunit nSAMN04488094_101322Not AvailableNegative346940 - 34838550811.1
nadh dehydrogenase subunit mSAMN04488094_101323Not AvailableNegative348387 - 34993756584.9

Displaying genes 511 – 520 of 4860 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.