Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted dna-binding protein, contains ribbon-helix-helix (rhh) domain | SAMN04488094_101284 | Not Available | Positive | 307404 - 307646 | 9022.79 |
| periplasmic nitrate reductase subunit napc | SAMN04488094_101285 | Not Available | Negative | 307685 - 308404 | 26940.6 |
| periplasmic nitrate reductase subunit napb | SAMN04488094_101286 | Not Available | Negative | 308432 - 308872 | 16075.0 |
| ferredoxin-type protein naph | SAMN04488094_101287 | Not Available | Negative | 308894 - 309817 | 33941.6 |
| periplasmic nitrate reductase subunit napg | SAMN04488094_101288 | Not Available | Negative | 309814 - 310674 | 30071.2 |
| periplasmic nitrate reductase subunit napa apoprotein | SAMN04488094_101289 | Not Available | Negative | 310704 - 313196 | 92951.8 |
| periplasmic nitrate reductase chaperone napd | SAMN04488094_101290 | Not Available | Negative | 313212 - 313493 | 9858.68 |
| ferredoxin-type protein napf | SAMN04488094_101291 | Not Available | Negative | 313490 - 313999 | 17537.9 |
| hypothetical protein | SAMN04488094_101292 | Not Available | Positive | 314248 - 314508 | 8747.27 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN04488094_101293 | Not Available | Negative | 314578 - 315450 | 30333.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
