Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylglucosamine-6-phosphate deacetylase | SAMN04488094_1433 | Not Available | Negative | 4957698 - 4958867 | 40806.7 |
| glucosamine-6-phosphate deaminase | SAMN04488094_1434 | Not Available | Negative | 4958860 - 4959642 | 27748.9 |
| rok family protein | SAMN04488094_1435 | Not Available | Negative | 4959647 - 4959860 | 7133.76 |
| hypothetical protein | SAMN04488094_1441 | Not Available | Negative | 4959879 - 4960115 | 8481.27 |
| hypothetical protein | SAMN04488094_1442 | Not Available | Positive | 4960629 - 4960913 | 10804.4 |
| putative atp-dependent endonuclease of the old family | SAMN04488094_1443 | Not Available | Negative | 4961230 - 4962792 | 55693.7 |
| reverse transcriptase (rna-dependent dna polymerase) | SAMN04488094_1451 | Not Available | Negative | 4963003 - 4963938 | 35513.0 |
| hypothetical protein | SAMN04488094_1452 | Not Available | Negative | 4964115 - 4965335 | 45746.1 |
| transposase | SAMN04488094_1461 | Not Available | Positive | 4965947 - 4966360 | 14604.5 |
| is66 orf2 like protein | SAMN04488094_1462 | Not Available | Positive | 4966360 - 4966710 | 13107.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
